Jalview 2.11.3.1

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WARNING! Downloading this JVL file might automatically switch your Jalview installation to version 2.11.3.1 (without auto-updates).

To revert back to the Jalview RELEASE channel, please visit the Using the Jalview Launch file page.

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The 2.11.3.1 addresses patches critical bugs in the Uniprot parser and PAE annotation row selection mechanism. It also ensures the jalview command line tool is marked as executable on OSX and other systems, and that jalview autodetects recent versions of Chimera and ChimeraX.

New Features

  • bio.tools record for jalview updated and synced with json in source release

Issues Resolved

  • Getdown does not preserve executable permission of jalview.sh file when it gets updated
  • Single position features from Uniprot are incorrectly parsed as non-positional features
  • Double clicking in PAE annotation to select column groups doesn’t always select group under the mouse
  • ChimeraX 1.3 and Chimera 1.16.2 are not automatically found