Jalview 2.10.4b1

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WARNING! Downloading this JVL file might automatically switch your Jalview installation to version 2.10.4b1 (without auto-updates).

To revert back to the Jalview RELEASE channel, please visit the Using the Jalview Launch file page.

Download the Jalview Launch file (.jvl) for version 2.10.4b1?


New Features

  • Use HGVS nomenclature for variant annotation retrieved from Uniprot
  • Windows File Shortcuts can be dragged onto the Jalview Desktop

Issues Resolved

  • Cannot import features with multiple variant elements (blocks import of some Uniprot records)
  • Clustal files with sequence positions in right-hand column parsed correctly
  • Wrap view - export to SVG - IDs shown but not alignment area in exported graphic
  • F2/Keyboard mode edits work when Overview window has input focus
  • Annotation panel set too high when annotation added to view (Windows)
  • Jalview Desktop is slow to start up when network connectivity is poor
  • Drag URL from chrome, firefox, IE to Jalview desktop on Windows doesn’t open file

    Dragging the currently open URL and links from a page viewed in Firefox or Chrome on Windows is now fully supported. If you are using Edge, only links in the page can be dragged, and with Internet Explorer, only the currently open URL in the browser can be dropped onto Jalview.

New Known Defects

  • Cancel option doesn’t reset Colour by Annotation