Issues Resolved

General

• Colour by conservation always enabled and no tick shown in menu when BLOSUM or PID shading applied
• FER1_ARATH and FER2_ARATH labels were switched in example sequences/projects/trees

Application

• Jalview projects with views of local PDB structure files saved on Windows cannot be opened on OSX
• Multiple structure views can be opened and superposed without timeout for structures with multiple models or multiple sequences in alignment
• Cannot import or associated local PDB files without a PDB ID HEADER line
• RMSD is not output in Jmol console when superposition is performed
• Drag and drop of URL from Browser fails for Linux and OSX versions earlier than El Capitan
• ENA client ignores invalid content from ENA server
• Exceptions are not raised in console when ENA client attempts to fetch non-existent IDs via Fetch DB Refs UI option
• Exceptions are not raised in console when a new view is created on the alignment
• OSX right-click fixed for group selections: CMD-click to insert/remove gaps in groups and CTRL-click to open group pop-up menu

Build and deployment

• URL link checker now copes with multi-line anchor tags

New Known Issues

• Drag and drop from URL links in browsers do not work on Windows